Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014537.1 Corchorus olitorius cultivar O-4 contig14570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22931

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1203--1227
4
6.2
4
100
0
50
24
24
52
0
1.48
2699--2744
20
2.2
21
81
14
51
28
6
8
56
1.54
5293--5364
1
72.0
1
83
0
81
90
6
2
0
0.54
5293--5364
29
2.5
28
88
4
108
90
6
2
0
0.54
10943--10967
2
12.5
2
100
0
50
48
0
52
0
1.00
12808--13109
151
2.0
151
100
0
604
29
29
15
25
1.96
13147--13187
21
2.0
21
100
0
82
19
24
14
41
1.89
14883--14998
34
3.4
34
83
2
153
34
20
24
20
1.97
21122--21165
20
2.2
20
83
4
61
56
4
0
38
1.20
21130--21168
20
2.0
20
94
0
69
56
5
0
38
1.22

Tables:   1

The End!