Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014538.1 Corchorus olitorius cultivar O-4 contig14571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49026

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--95
35
1.9
35
84
0
89
25
0
32
41
1.56
937--1104
22
7.7
22
69
14
98
39
8
13
38
1.75
6963--6988
3
8.7
3
100
0
52
69
0
0
30
0.89
17323--17347
7
3.6
7
100
0
50
28
28
16
28
1.97
17749--17861
57
2.0
57
94
0
199
32
6
7
53
1.55
22625--22696
29
2.5
29
100
0
144
31
37
18
12
1.88
23163--23194
15
2.1
15
100
0
64
75
0
12
12
1.06
33119--33158
15
2.6
16
88
4
55
15
10
12
62
1.54
44277--44305
3
9.7
3
100
0
58
68
0
0
31
0.89
48204--48238
16
2.2
16
90
10
54
25
0
28
45
1.54

Tables:   1

The End!