Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014542.1 Corchorus olitorius cultivar O-4 contig14575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5453

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
470--853
195
2.0
195
89
2
594
32
12
18
36
1.88
1700--1759
31
1.9
31
89
0
93
31
26
11
30
1.92
3859--3883
2
12.5
2
100
0
50
52
0
0
48
1.00
3875--3952
41
1.9
40
94
2
138
51
8
2
37
1.47
3943--3988
24
2.0
23
86
4
65
32
4
6
56
1.45
4063--4472
203
2.0
202
94
2
725
36
10
8
43
1.71
4994--5063
36
1.9
36
91
0
113
60
8
10
21
1.55

Tables:   1

The End!