Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014559.1 Corchorus olitorius cultivar O-4 contig14592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75005

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2099--2125
14
1.9
14
100
0
54
44
0
11
44
1.39
6320--6366
15
3.3
14
82
11
51
38
0
0
61
0.96
7927--8004
32
2.4
32
95
0
138
37
15
12
34
1.86
19416--19460
21
2.2
20
84
11
56
31
15
28
24
1.96
21767--22096
167
2.0
167
100
0
660
33
23
12
30
1.92
23415--23443
2
14.5
2
100
0
58
51
0
0
48
1.00
37683--37713
5
6.4
5
96
3
55
80
0
0
19
0.71

Tables:   1

The End!