Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014567.1 Corchorus olitorius cultivar O-4 contig14600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62030

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16111--16145
1
35.0
1
100
0
70
100
0
0
0
0.00
16144--16169
3
8.7
3
100
0
52
69
30
0
0
0.89
18973--19031
22
3.0
18
77
18
55
32
20
8
38
1.83
19001--19030
11
2.7
11
100
0
60
33
20
10
36
1.86
21537--21572
17
2.1
17
89
0
54
50
19
22
8
1.74
22771--22808
18
2.2
17
90
4
58
0
23
0
76
0.79
26228--26420
94
2.1
94
98
0
377
37
20
16
25
1.93
28359--28437
32
2.5
32
74
0
77
48
27
12
11
1.76
34334--34615
141
2.0
141
94
0
492
29
19
20
30
1.97
36423--36455
3
11.0
3
93
0
57
33
3
0
63
1.10
36423--36458
12
3.0
12
95
0
63
33
5
0
61
1.19
46376--46451
29
2.6
29
79
12
82
31
23
10
34
1.89
46740--46829
31
3.0
31
78
15
98
34
14
24
26
1.94
46753--46829
29
2.5
31
87
6
113
31
12
27
28
1.93
47281--47331
21
2.4
21
81
18
61
58
0
0
41
0.98
47283--47331
25
2.0
25
84
8
64
59
0
0
40
0.98
50241--50387
51
2.8
51
93
2
240
44
9
7
38
1.65
53283--53336
3
18.0
3
100
0
108
66
0
0
33
0.92
53337--53368
3
10.7
3
100
0
64
34
0
0
65
0.93
57838--57954
63
1.9
61
92
3
198
38
5
10
46
1.60
58235--58283
21
2.5
20
87
9
66
36
4
2
57
1.30

Tables:   1

The End!