Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014582.1 Corchorus olitorius cultivar O-4 contig14615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22048

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1812
333
5.6
329
82
6
2099
36
14
15
33
1.88
1328--2341
529
1.9
528
84
4
1371
35
14
16
33
1.89
1857--4203
331
7.0
330
79
7
2119
36
14
14
34
1.88
1864--4203
673
3.5
661
81
5
2340
36
14
14
34
1.88
10347--10403
20
2.8
21
71
10
55
54
29
12
3
1.54
11499--11525
6
4.5
6
100
0
54
55
14
0
29
1.40
17234--17263
2
15.0
2
100
0
60
50
0
0
50
1.00
17386--17426
2
20.5
2
94
0
73
48
0
0
51
1.00

Tables:   1

The End!