Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014583.1 Corchorus olitorius cultivar O-4 contig14616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52274

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13828--13892
30
2.2
30
100
0
130
36
15
12
35
1.85
36980--37016
1
37.0
1
100
0
74
0
0
0
100
0.00
39781--39840
16
3.7
16
91
4
102
5
1
11
81
0.91
39784--39848
17
3.8
17
88
8
96
6
1
10
81
0.93
39781--39849
34
2.1
34
94
2
122
5
1
11
81
0.93
39784--39849
18
3.9
17
90
9
100
6
1
10
81
0.92
52235--52274
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!