Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014584.1 Corchorus olitorius cultivar O-4 contig14617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46630

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3385--3453
28
2.6
27
73
15
72
62
0
18
18
1.33
3455--3569
4
30.0
4
67
18
66
66
2
6
24
1.30
3454--3559
27
4.2
27
71
20
95
66
2
6
24
1.30
3484--3570
22
4.0
19
73
20
57
66
2
8
22
1.30
3444--3558
46
2.5
46
92
1
187
66
2
6
23
1.28
4123--4181
16
3.6
16
79
6
57
52
11
0
35
1.38
7847--7931
40
2.2
39
82
6
100
42
15
11
30
1.83
8027--8058
13
2.5
13
94
0
55
31
6
50
12
1.65
21277--21320
21
2.1
21
100
0
88
25
22
22
29
1.99
29900--29939
18
2.2
18
86
8
55
47
2
30
20
1.63
45596--46630
329
3.1
329
85
6
1301
32
13
17
36
1.89

Tables:   1

The End!