Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014594.1 Corchorus olitorius cultivar O-4 contig14627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8576

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2845--3182
179
1.9
177
85
3
473
33
15
15
35
1.89
4102--4261
60
2.7
58
83
9
196
36
16
18
28
1.93
4162--4265
31
3.4
31
70
15
108
37
17
19
25
1.93
4304--4377
31
2.4
31
100
0
148
24
20
13
41
1.88
4336--4475
60
2.3
60
91
0
217
27
19
17
36
1.94
8483--8507
13
1.9
13
100
0
50
56
8
8
28
1.57
8544--8574
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!