Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014601.1 Corchorus olitorius cultivar O-4 contig14634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36104

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--333
31
3.1
31
98
0
183
28
5
19
46
1.71
12928--12953
5
5.2
5
100
0
52
0
0
57
42
0.98
14043--14091
17
2.8
17
87
6
62
28
2
12
57
1.46
17883--17943
32
1.9
32
93
0
104
26
19
6
47
1.74
20761--20812
26
2.0
26
100
0
104
34
11
3
50
1.57
20768--20828
26
2.3
26
82
2
68
36
9
4
49
1.58
22680--22719
19
2.2
18
86
4
53
30
30
12
27
1.93
27716--27761
24
2.0
23
82
4
56
60
6
6
26
1.46
29876--29924
1
49.0
1
79
0
53
89
0
10
0
0.48
31008--31042
18
1.9
18
88
0
52
51
28
2
17
1.59

Tables:   1

The End!