Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014603.1 Corchorus olitorius cultivar O-4 contig14636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38355

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11146--11330
93
2.0
93
90
0
289
52
2
11
33
1.51
13737--13793
30
1.9
30
96
0
105
17
10
10
61
1.56
14020--14073
28
1.9
28
84
0
72
40
7
7
44
1.60
17741--17805
31
2.1
31
85
0
85
32
15
15
36
1.89
17833--17891
31
1.9
31
86
6
84
38
15
15
30
1.88
18631--18679
19
2.6
19
100
0
98
26
16
16
40
1.89
22094--22131
18
2.1
18
100
0
76
42
10
5
42
1.62
23021--23105
4
21.2
4
69
17
52
43
29
5
21
1.76
23027--23105
27
2.9
27
82
0
104
44
29
5
21
1.73
24035--24228
96
2.0
96
96
0
361
30
21
17
29
1.96
24462--24501
19
2.1
19
100
0
80
52
15
5
27
1.63
27661--27716
29
1.9
29
88
0
85
55
7
19
17
1.65
28238--28352
56
2.1
56
98
0
221
36
16
8
38
1.80
38237--38355
2
59.5
2
96
3
222
49
0
49
0
1.06

Tables:   1

The End!