Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014610.1 Corchorus olitorius cultivar O-4 contig14643, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54828

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4550--4610
29
2.1
30
84
3
79
40
4
3
50
1.40
6391--6432
22
1.9
22
85
0
57
14
16
26
42
1.86
10557--10643
44
2.0
44
97
2
167
33
18
18
29
1.95
30999--31146
48
3.1
48
98
0
287
31
16
31
20
1.95
37550--37586
19
2.0
19
89
5
58
64
0
0
35
0.94
41652--41786
65
2.1
65
87
2
191
37
27
7
27
1.83
43642--43678
19
2.0
19
94
5
67
67
0
0
32
0.91
46819--46869
26
2.0
26
88
0
75
47
5
17
29
1.71
47323--47355
17
2.0
16
94
5
57
48
0
3
48
1.17
53700--53728
15
1.9
15
100
0
58
0
0
6
93
0.36

Tables:   1

The End!