Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014614.1 Corchorus olitorius cultivar O-4 contig14647, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44316

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--380
31
2.1
31
82
5
78
35
12
12
40
1.80
411--480
31
2.3
31
82
0
86
41
12
11
34
1.79
2371--2397
2
13.5
2
100
0
54
51
0
0
48
1.00
2713--2752
2
20.0
2
100
0
80
0
50
0
50
1.00
17544--17592
25
1.9
26
87
4
73
42
16
6
34
1.73
21775--21833
28
2.1
28
87
3
84
27
1
23
47
1.61
21783--21825
14
3.1
14
77
12
52
25
0
30
44
1.55
25551--25586
13
2.8
13
95
0
63
16
5
27
50
1.68
26345--26386
16
2.6
16
81
14
50
71
0
23
4
1.05
42806--42845
21
1.9
21
94
0
71
35
10
20
35
1.86
43747--43988
82
3.0
82
96
1
432
25
17
21
35
1.95

Tables:   1

The End!