Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014615.1 Corchorus olitorius cultivar O-4 contig14648, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68600

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20972--21039
34
2.0
34
88
2
100
32
14
19
33
1.92
26204--26234
15
2.1
15
100
0
62
25
16
19
38
1.92
36530--36570
19
2.2
18
87
12
57
36
2
2
58
1.24
46097--46207
53
2.1
53
98
0
213
30
18
5
45
1.72
51288--51351
2
32.0
2
100
0
128
50
50
0
0
1.00
57576--57625
14
3.1
17
67
21
52
30
4
18
48
1.66
61785--61816
16
2.0
16
100
0
64
43
0
18
37
1.51
62425--62543
59
2.0
59
96
0
220
36
23
14
26
1.93
66757--66864
31
3.5
31
69
14
107
32
19
20
27
1.97
66907--67064
60
2.7
60
86
5
232
27
17
20
34
1.95

Tables:   1

The End!