Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014619.1 Corchorus olitorius cultivar O-4 contig14652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81507

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6348--6376
1
29.0
1
100
0
58
100
0
0
0
0.00
17124--17214
42
2.1
42
95
2
164
28
21
19
29
1.98
19665--19696
9
3.4
9
95
4
55
21
0
0
78
0.76
20109--20154
16
2.8
17
74
12
51
30
17
8
43
1.79
22745--22845
50
2.0
51
86
1
141
42
16
27
12
1.85
23425--23514
31
3.0
31
85
3
112
14
18
27
38
1.90
23494--23582
31
3.0
31
77
4
94
15
23
24
35
1.94
29782--29876
48
2.0
48
89
4
147
44
21
13
21
1.86
30398--30432
1
35.0
1
100
0
70
100
0
0
0
0.00
32265--32296
16
1.9
17
93
6
57
6
25
0
68
1.12
43503--43581
36
2.2
36
100
0
158
30
20
15
34
1.93
73444--73498
29
1.9
28
82
10
67
47
10
20
21
1.80
78987--79022
3
12.0
3
100
0
72
66
33
0
0
0.92

Tables:   1

The End!