Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014623.1 Corchorus olitorius cultivar O-4 contig14656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7003

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--380
188
2.0
190
86
6
538
39
11
12
36
1.80
278--1042
323
2.3
323
78
7
726
35
13
15
35
1.87
3188--3232
23
1.9
24
90
4
74
62
13
13
11
1.55
4559--5267
62
11.2
62
91
4
1112
35
21
40
3
1.70
4559--5267
190
3.7
188
92
4
1156
35
21
40
3
1.70
5229--5323
34
2.8
34
88
4
147
44
16
35
3
1.64
6185--6285
45
2.2
45
91
0
157
30
23
21
23
1.99
6367--6396
3
10.0
3
100
0
60
66
0
33
0
0.92

Tables:   1

The End!