Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014634.1 Corchorus olitorius cultivar O-4 contig14667, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41880

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14527--14562
11
3.2
11
84
7
54
44
11
44
0
1.39
16439--16470
15
2.1
15
94
0
55
34
0
31
34
1.58
17335--17370
18
2.1
18
89
5
56
22
11
8
58
1.59
24638--24662
13
1.9
13
100
0
50
92
8
0
0
0.40
26434--26473
21
1.9
21
89
0
62
25
45
2
27
1.66
34883--35113
58
4.0
58
96
0
408
24
19
20
35
1.96
38779--38868
36
2.5
36
85
3
119
24
18
38
17
1.92
40924--40962
20
2.0
20
89
0
60
12
2
17
66
1.35

Tables:   1

The End!