Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014635.1 Corchorus olitorius cultivar O-4 contig14668, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53354

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3289--3342
22
2.5
22
79
11
58
50
7
27
14
1.70
3415--3493
39
2.0
39
87
0
113
29
7
20
43
1.79
4648--4748
52
1.9
52
97
0
193
37
17
14
29
1.90
16222--16946
162
4.5
158
87
4
925
37
13
10
38
1.79
16222--16946
323
2.2
319
85
5
958
37
13
10
38
1.79
17842--17922
42
1.9
42
82
9
103
23
32
20
23
1.98
32232--32275
2
22.0
2
95
0
79
0
47
0
52
1.00
35264--35520
86
3.0
86
89
3
385
31
27
15
25
1.96
37928--38083
66
2.4
66
86
0
222
32
12
19
35
1.89
39125--39253
64
2.0
64
96
0
240
31
17
17
34
1.93
45581--45771
31
6.3
31
81
2
226
18
23
25
32
1.97
45580--45771
61
3.1
61
86
1
251
18
22
26
32
1.97
45581--45765
92
2.0
91
84
3
237
18
22
25
33
1.96
46363--46389
2
13.5
2
100
0
54
0
0
48
51
1.00
53221--53256
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!