Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014638.1 Corchorus olitorius cultivar O-4 contig14671, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42412

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
50
0
0
50
1.00
465--496
15
2.1
15
94
0
55
40
12
18
28
1.87
8523--8581
28
2.1
28
100
0
118
47
11
6
33
1.67
18475--18508
15
2.3
15
89
0
50
32
8
8
50
1.64
19533--19566
14
2.4
14
90
0
50
44
5
0
50
1.26
21594--21623
2
15.0
2
100
0
60
50
0
0
50
1.00
30402--30444
21
2.0
21
90
0
68
13
16
16
53
1.73
32132--32156
1
25.0
1
100
0
50
100
0
0
0
0.00
32294--32330
18
2.1
18
100
0
74
48
10
0
40
1.38

Tables:   1

The End!