Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014639.1 Corchorus olitorius cultivar O-4 contig14672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35766

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4398--4429
2
16.0
2
100
0
64
50
0
50
0
1.00
12507--12574
32
2.2
31
84
7
84
29
25
25
20
1.99
16090--16155
24
2.5
26
88
11
100
15
6
22
56
1.61
20460--20646
94
2.0
94
98
0
365
35
21
14
28
1.93
23707--23751
19
2.3
20
81
11
58
17
6
2
73
1.15
24337--24362
7
3.7
7
100
0
52
57
0
30
11
1.34
33863--33918
27
2.1
27
89
0
85
48
7
32
12
1.68
34620--34668
19
2.5
19
96
3
89
32
18
42
6
1.75

Tables:   1

The End!