Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014663.1 Corchorus olitorius cultivar O-4 contig14696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42332

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8914--8978
6
10.8
6
74
0
58
21
15
41
21
1.90
8911--8978
18
3.8
18
86
0
82
22
14
42
20
1.88
8996--9044
18
2.7
18
80
0
53
26
18
30
24
1.98
16656--16687
13
2.4
14
94
5
57
71
6
0
21
1.07
19615--19639
1
25.0
1
100
0
50
0
0
100
0
0.00
21518--21566
26
2.0
25
85
14
68
44
20
10
24
1.82
24400--24438
2
19.5
2
94
0
69
2
48
0
48
1.15
24438--24513
2
38.0
2
85
5
100
52
1
2
43
1.23
24438--24518
27
3.0
27
90
3
128
53
2
3
40
1.32
26166--26194
3
9.7
3
100
0
58
68
0
0
31
0.89
30150--30226
31
2.4
32
86
2
102
32
11
28
27
1.92
30172--30250
31
2.6
30
79
15
83
36
13
26
22
1.92

Tables:   1

The End!