Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014668.1 Corchorus olitorius cultivar O-4 contig14701, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46109

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3080--3133
19
2.6
21
77
19
60
38
3
18
38
1.69
7892--8144
127
2.0
128
92
2
420
32
22
21
22
1.98
11227--11274
25
1.9
25
86
0
69
50
14
2
33
1.55
13289--13427
69
2.0
69
85
2
190
46
14
12
25
1.80
37950--38282
177
1.9
177
85
3
470
33
9
10
45
1.72
38186--38661
166
2.9
163
87
4
647
34
10
10
45
1.73
38578--38769
101
1.9
99
88
6
289
31
10
8
49
1.67
38677--39063
142
2.7
141
88
5
557
35
12
6
44
1.68

Tables:   1

The End!