Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014686.1 Corchorus olitorius cultivar O-4 contig14719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10571

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--3002
332
9.1
332
79
8
2920
32
13
17
36
1.89
5657--5725
30
2.2
32
78
17
83
34
18
7
39
1.79
5716--5829
59
1.9
60
82
5
142
37
16
10
35
1.83
5961--6039
31
2.5
31
97
0
149
37
2
30
29
1.71
6163--7778
324
5.0
320
79
7
1568
36
16
14
32
1.90
6152--7778
655
2.5
651
82
5
1792
36
16
14
32
1.90
8888--9469
308
1.9
307
84
6
775
35
16
15
33
1.90
9732--10556
336
2.5
333
84
3
1023
36
15
15
33
1.88

Tables:   1

The End!