Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014693.1 Corchorus olitorius cultivar O-4 contig14726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57417

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1335--1412
30
2.7
29
88
6
104
17
32
11
38
1.86
1538--1599
29
2.1
29
91
5
99
40
17
22
19
1.91
4717--4767
25
2.0
25
88
3
75
43
9
7
39
1.67
7178--7251
36
2.1
36
92
0
121
27
28
17
27
1.98
8098--8159
30
2.1
30
93
0
106
46
4
22
25
1.71
11481--11560
40
2.1
38
92
4
133
47
17
2
32
1.61
13233--13293
30
2.0
30
100
0
122
40
26
9
22
1.85
15095--15127
12
2.6
13
85
9
50
42
0
24
33
1.55
38111--38140
9
3.3
9
95
0
51
13
0
3
83
0.77
38341--38374
15
2.3
15
90
5
52
20
0
8
70
1.13

Tables:   1

The End!