Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014694.1 Corchorus olitorius cultivar O-4 contig14727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96098

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9067--9273
103
2.0
101
86
7
283
34
10
17
36
1.85
20610--20683
31
2.4
31
84
4
87
35
16
17
31
1.92
47828--47889
31
2.0
31
100
0
124
29
22
6
41
1.78
47901--48079
93
1.9
93
91
0
295
32
13
2
51
1.55
48686--48719
16
2.1
16
88
0
50
8
14
35
41
1.77
52845--52891
15
3.3
14
77
11
51
36
2
8
53
1.44
63592--63625
14
2.4
14
90
9
52
0
14
2
82
0.79
64718--64921
105
2.0
101
90
5
320
30
11
14
43
1.81
77902--78012
58
1.9
57
87
5
161
31
14
20
33
1.93
79271--79340
36
1.9
36
91
0
113
21
10
8
60
1.55
79853--80264
207
2.0
200
93
4
700
44
8
10
36
1.69
80369--80449
39
2.0
40
88
2
119
38
3
8
49
1.51
81690--81755
30
2.2
29
76
10
71
34
21
13
30
1.92
90194--90222
14
2.1
14
100
0
58
24
6
27
41
1.80
90563--90893
26
12.7
26
90
0
509
30
14
23
32
1.94
91279--91323
5
9.8
5
81
18
62
22
22
0
55
1.44
91279--91323
13
3.3
13
93
6
72
22
22
0
55
1.44
91987--92888
323
2.7
328
80
8
1040
34
13
15
36
1.87
92226--93874
685
2.4
680
84
3
2114
33
14
15
36
1.88
94845--95419
307
1.9
308
81
7
720
33
14
16
35
1.90

Tables:   1

The End!