Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014697.1 Corchorus olitorius cultivar O-4 contig14730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26164

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
867--942
31
2.6
28
75
8
73
44
13
25
17
1.84
5142--5166
12
2.1
12
100
0
50
16
44
32
8
1.76
5148--5226
31
2.5
31
97
0
149
18
27
27
25
1.98
5273--5321
23
2.1
24
92
3
82
65
10
10
14
1.47
6138--6191
26
2.1
26
96
0
99
40
12
7
38
1.72
6227--6280
27
2.0
28
92
3
92
42
7
3
46
1.49

Tables:   1

The End!