Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014699.1 Corchorus olitorius cultivar O-4 contig14732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11057

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1535
329
4.7
331
80
4
1813
36
15
14
33
1.88
1532--2897
331
4.1
329
78
5
1250
34
16
14
34
1.90
1532--2897
661
2.1
664
82
4
1675
34
16
14
34
1.90
2899--3130
30
8.1
30
70
14
184
27
15
17
39
1.90
2949--3126
86
2.1
84
85
2
239
28
14
16
39
1.88
3958--4120
86
1.9
88
84
5
222
33
12
9
44
1.74
4307--4543
95
2.5
95
79
2
233
33
15
9
41
1.79
5667--7485
332
5.5
328
79
7
1641
36
16
12
33
1.87
5785--7485
667
2.6
660
79
7
1697
36
16
13
33
1.87
7501--11012
666
5.3
657
79
7
2495
36
16
14
32
1.89
7484--10583
333
9.3
332
79
6
2405
36
16
14
32
1.89
10284--10889
306
2.0
306
90
0
953
36
18
14
31
1.90

Tables:   1

The End!