Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014706.1 Corchorus olitorius cultivar O-4 contig14739, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5929

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1208--1699
35
13.8
36
85
5
596
41
19
14
25
1.88
1208--2736
70
21.4
70
79
11
1058
41
18
13
26
1.87
1348--2746
105
13.4
105
83
8
1670
41
18
13
26
1.87
1698--2013
35
8.6
35
81
11
305
42
17
13
25
1.87
1609--1786
92
2.0
89
93
3
302
42
19
12
25
1.86
1911--1965
19
3.1
19
67
32
57
40
20
14
25
1.90
1960--2069
56
2.0
55
94
1
193
43
17
10
28
1.82
1934--2104
91
1.9
92
93
1
299
42
18
12
27
1.86
2025--2736
35
20.2
35
88
2
980
41
18
12
26
1.87
2712--2843
54
2.5
54
83
6
155
31
23
18
27
1.97
2730--2846
54
2.2
54
90
1
182
30
23
17
28
1.97
2766--2981
54
4.0
54
75
5
177
34
21
15
28
1.94
4321--4376
26
2.2
26
83
6
69
7
21
3
67
1.30

Tables:   1

The End!