Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014710.1 Corchorus olitorius cultivar O-4 contig14743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5266

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
298--326
2
14.5
2
100
0
58
0
48
0
51
1.00
459--545
10
7.9
10
68
26
52
0
33
16
50
1.45
436--560
34
3.7
34
97
0
232
1
32
18
48
1.58
532--979
62
7.2
62
96
1
756
3
40
21
34
1.72
961--991
14
2.2
14
100
0
62
0
41
6
51
1.27
3118--3230
56
2.0
56
100
0
226
41
7
17
33
1.77

Tables:   1

The End!