Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014724.1 Corchorus olitorius cultivar O-4 contig14757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42857

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--40
2
16.5
2
93
6
59
47
2
0
50
1.16
35725--35766
22
1.9
22
100
0
84
50
2
19
28
1.60
37280--37309
16
1.9
16
93
6
53
56
13
0
30
1.37
38993--39036
4
11.2
4
85
4
63
22
2
25
50
1.61
39638--39710
36
2.0
36
81
5
85
38
5
21
34
1.77
40379--40486
29
3.7
29
78
7
128
21
12
27
37
1.90
40356--40456
29
3.5
29
77
8
116
19
9
28
41
1.84
40362--40485
59
2.1
57
94
2
212
20
11
26
41
1.86
41282--41312
2
15.5
2
100
0
62
48
0
0
51
1.00
42821--42857
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!