Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014729.1 Corchorus olitorius cultivar O-4 contig14762, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24880

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3944
333
11.9
333
84
3
4557
35
16
15
32
1.90
32--3914
667
5.9
652
82
7
2336
35
16
15
32
1.90
4298--4327
15
1.9
16
93
6
53
53
3
0
43
1.17
4809--4893
42
2.0
42
93
0
143
49
9
10
30
1.69
14587--14618
11
2.9
11
95
0
55
9
9
21
59
1.57
14649--14698
27
2.0
27
84
11
70
44
0
0
56
0.99
14663--14749
40
2.1
41
81
10
108
47
2
1
49
1.21
19817--19890
38
1.9
38
97
0
139
55
10
6
27
1.59
23933--23987
21
2.8
19
81
10
74
36
9
20
34
1.84
24483--24522
21
1.9
21
89
0
62
7
17
0
75
1.03

Tables:   1

The End!