Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014732.1 Corchorus olitorius cultivar O-4 contig14765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50788

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2751--2808
24
2.4
24
85
0
80
34
58
3
3
1.32
2749--2914
76
2.2
75
90
3
262
28
50
6
13
1.67
2827--2858
12
2.7
12
95
0
55
28
59
0
12
1.34
2875--2971
27
3.4
27
65
15
77
27
47
9
15
1.76
2848--3081
60
3.8
60
97
1
432
28
48
10
13
1.75
16228--16257
9
3.3
9
90
0
51
0
26
10
63
1.26
16230--16272
19
2.3
18
88
4
59
0
34
11
53
1.37
29254--29297
23
1.9
23
100
0
88
27
20
27
25
1.99
35533--35712
97
1.9
97
98
0
351
41
13
16
27
1.87
46334--46365
3
10.7
3
93
0
55
65
0
34
0
0.93

Tables:   1

The End!