Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014734.1 Corchorus olitorius cultivar O-4 contig14767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84735

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8921--9001
39
2.0
40
90
2
128
50
7
4
37
1.52
9088--9494
202
2.0
200
96
0
751
36
11
8
43
1.71
10007--10076
36
1.9
36
88
0
104
58
8
11
21
1.59
12351--12389
19
2.0
21
85
10
55
46
2
10
41
1.51
14347--14416
32
2.2
32
100
0
140
27
8
2
61
1.39
42701--42806
26
3.8
26
91
7
149
55
14
3
26
1.56
42788--42823
17
2.1
17
100
0
72
66
11
5
16
1.40
60938--60999
3
20.7
3
80
12
65
61
3
3
32
1.28
63710--63782
29
2.5
29
81
2
101
43
16
17
21
1.87
67783--67824
2
21.0
2
86
13
52
50
0
4
45
1.23
67767--67822
28
2.1
28
83
6
71
50
0
8
41
1.34
71765--71834
29
2.4
29
100
0
140
38
22
14
24
1.91

Tables:   1

The End!