Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014749.1 Corchorus olitorius cultivar O-4 contig14782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33080

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9971--10008
18
2.1
18
95
0
67
15
39
7
36
1.77
11952--12009
19
2.9
21
76
10
66
32
18
8
39
1.82
12696--12737
22
2.0
22
90
4
68
14
14
35
35
1.86
13820--13853
14
2.4
14
90
0
50
0
14
5
79
0.91
16677--16756
39
2.0
40
90
4
126
27
13
15
43
1.84
22002--22044
2
21.0
2
80
4
50
46
2
4
46
1.36
24324--24358
14
2.5
14
95
0
61
31
0
25
42
1.55
24646--24676
15
2.1
15
93
0
53
51
0
0
48
1.00

Tables:   1

The End!