Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014753.1 Corchorus olitorius cultivar O-4 contig14786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15762

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4041--4080
18
2.2
18
90
4
62
70
2
22
5
1.19
5068--6276
30
40.1
30
80
6
1223
48
16
14
20
1.80
5394--5482
25
3.4
25
79
11
79
51
13
12
22
1.74
6425--6746
156
2.1
156
96
0
599
33
17
22
27
1.96
6731--6777
15
3.3
15
77
17
64
44
2
19
34
1.62
6644--6900
138
1.9
138
88
3
392
35
14
21
28
1.92
6965--7141
69
2.6
69
93
0
291
28
15
29
26
1.96
8730--8772
6
7.3
6
84
5
52
13
0
11
74
1.07
9150--9186
17
2.2
17
90
0
56
16
8
0
75
1.02
15161--15202
15
2.7
15
92
3
66
11
9
14
64
1.50

Tables:   1

The End!