Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014767.1 Corchorus olitorius cultivar O-4 contig14800, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25534

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--47
2
13.5
2
100
0
54
51
48
0
0
1.00
1802--1871
36
1.9
36
91
0
113
21
10
8
60
1.55
2905--2985
39
2.0
40
92
2
137
37
3
8
50
1.51
3276--3379
22
4.8
22
80
5
113
39
12
10
37
1.78
8763--8848
31
2.8
31
81
0
100
34
18
20
25
1.96
11137--11193
16
3.0
20
69
30
52
35
0
1
63
1.05
11715--11880
84
2.0
85
95
1
298
43
10
19
25
1.84
12309--12366
19
2.9
19
84
5
71
31
20
12
36
1.89
20381--20417
19
1.9
19
94
0
65
29
13
13
43
1.82
24566--24697
24
5.7
23
66
16
76
43
0
4
50
1.27
24548--24688
20
7.4
20
65
24
58
44
0
3
51
1.24
24587--24733
46
3.3
41
68
28
106
42
0
4
52
1.27
24546--24732
92
2.0
94
94
2
333
44
0
4
50
1.25

Tables:   1

The End!