Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014773.1 Corchorus olitorius cultivar O-4 contig14806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20843

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153--276
66
2.0
63
89
9
191
22
24
10
42
1.85
5709--5759
26
1.9
25
84
11
66
49
27
7
15
1.72
10004--10045
17
2.5
17
84
0
57
26
19
19
35
1.95
13468--13506
20
1.9
20
85
15
53
38
10
10
41
1.73
19322--19470
3
49.7
3
72
5
77
33
8
34
23
1.84
19363--19453
27
3.4
27
78
6
103
37
8
35
18
1.82
19379--19470
15
6.1
15
79
0
94
34
8
36
19
1.83

Tables:   1

The End!