Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014778.1 Corchorus olitorius cultivar O-4 contig14811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29811

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2865--3045
99
1.8
99
93
1
319
54
1
10
33
1.42
6759--6795
18
2.1
18
89
0
56
5
10
0
83
0.79
9024--9286
33
8.7
33
80
14
252
30
22
22
25
1.99
9024--9269
27
8.5
25
76
18
114
30
21
22
25
1.98
9024--9289
30
8.9
30
84
10
280
30
22
22
24
1.99
10036--10064
2
14.5
2
100
0
58
51
0
0
48
1.00
14493--14575
15
5.7
15
68
16
59
51
3
2
42
1.32
14491--14534
21
2.1
21
83
8
54
54
0
2
43
1.12
14491--14579
30
3.0
30
81
6
117
51
3
3
41
1.35
23666--23745
42
1.9
42
86
0
115
31
7
21
40
1.81
24029--24107
42
1.9
41
97
2
149
40
22
7
29
1.82
24128--24163
18
2.0
18
88
0
54
13
13
25
47
1.80
24606--24668
32
2.0
32
100
0
126
33
0
15
50
1.45
25674--25700
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!