Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014780.1 Corchorus olitorius cultivar O-4 contig14813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76347

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13151--13186
18
2.0
18
100
0
72
27
33
0
38
1.57
27340--27594
123
2.0
123
88
7
377
37
10
1
49
1.49
27340--27594
131
2.0
123
91
6
411
37
10
1
49
1.49
27580--27618
14
2.9
13
80
3
51
41
2
2
53
1.28
35200--35224
7
3.6
7
100
0
50
0
28
0
72
0.86
42111--42178
34
2.0
34
97
0
127
29
22
14
33
1.94
43234--43283
24
2.1
24
96
0
91
26
20
22
32
1.98
44066--44105
18
2.3
18
86
4
55
32
0
15
52
1.43
55002--55038
7
5.3
7
100
0
74
0
27
0
72
0.84
65861--65918
28
2.1
28
93
0
98
39
22
10
27
1.86
75850--75930
39
2.0
40
85
2
110
49
8
4
37
1.55
75921--75967
25
1.9
24
91
4
76
31
6
6
55
1.51

Tables:   1

The End!