Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014782.1 Corchorus olitorius cultivar O-4 contig14815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22678

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2041--2256
22
9.8
22
76
7
161
41
9
14
34
1.78
2044--2976
44
21.2
45
67
14
249
39
9
14
36
1.79
2090--2278
66
2.9
66
76
3
186
42
8
12
35
1.74
2381--3027
22
29.9
22
71
13
281
40
9
13
36
1.77
2594--2697
23
4.6
23
82
8
115
36
9
13
40
1.77
3645--3679
11
3.2
11
83
0
52
77
17
5
0
0.96
8876--8916
2
20.5
2
100
0
82
0
48
0
51
1.00
20974--21005
3
10.7
3
100
0
64
34
0
0
65
0.93

Tables:   1

The End!