Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014783.1 Corchorus olitorius cultivar O-4 contig14816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41544

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4898--4932
18
1.9
18
94
0
61
51
11
8
28
1.67
5062--5109
18
2.5
19
83
10
62
52
0
0
47
1.00
5098--5141
23
1.9
23
86
9
63
47
9
6
36
1.62
5135--5210
35
2.2
35
92
0
134
40
17
17
25
1.90
11370--11418
26
2.0
26
88
8
75
69
4
12
14
1.33
12084--12124
22
2.0
22
90
9
68
21
24
19
34
1.97
17960--18027
33
2.1
33
100
0
136
26
14
35
23
1.94
33427--33489
1
63.0
1
77
0
63
0
1
9
88
0.57
33427--33489
12
5.4
12
83
12
87
0
1
9
88
0.57
33427--33489
11
5.5
11
82
14
83
0
1
9
88
0.57
33430--33489
23
2.6
23
92
5
95
0
1
10
88
0.59

Tables:   1

The End!