Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014787.1 Corchorus olitorius cultivar O-4 contig14820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23646

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2943--2992
25
2.0
25
92
4
82
60
6
14
20
1.55
3385--3447
6
10.5
6
83
6
65
33
46
15
4
1.67
3413--3451
18
2.2
18
95
0
69
25
51
15
7
1.70
3413--3451
12
3.2
12
88
0
60
25
51
15
7
1.70
3451--3506
28
2.0
28
100
0
112
25
7
17
50
1.72
4419--4487
33
2.1
33
91
5
113
50
4
28
15
1.63
13184--13214
16
1.9
16
93
0
53
48
6
3
41
1.45
17591--17635
21
2.1
21
100
0
90
22
13
13
51
1.75
19335--19372
19
2.0
19
100
0
76
36
21
5
36
1.76
22629--22776
22
6.8
22
72
14
103
39
13
8
39
1.74
22629--22753
65
1.9
63
81
12
146
40
12
8
39
1.72
22629--22776
44
3.4
43
75
13
142
39
13
8
39
1.74
22768--22808
21
2.0
20
85
4
55
21
19
14
43
1.87

Tables:   1

The End!