Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014789.1 Corchorus olitorius cultivar O-4 contig14822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14028

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
866--940
24
3.1
24
76
0
78
6
26
40
26
1.81
1210--1577
55
6.6
55
84
6
429
20
23
28
27
1.99
1347--1657
83
3.8
81
75
9
295
22
23
28
25
1.99
1210--1577
111
3.3
111
87
4
476
20
23
28
27
1.99
1206--1621
28
14.9
28
71
9
222
20
24
28
27
1.99
2622--2657
18
2.1
18
89
5
56
36
25
0
38
1.56
3300--3900
307
2.0
307
96
0
1121
24
20
21
33
1.97
5121--5179
31
1.9
31
86
6
84
13
18
35
32
1.90
6745--6805
29
2.1
28
82
14
72
49
3
6
40
1.45
11893--11933
21
2.0
21
85
0
55
56
24
0
19
1.42
12717--12764
19
2.7
17
87
12
78
45
14
10
29
1.78
13176--13207
2
16.0
2
93
0
55
53
0
0
46
1.00

Tables:   1

The End!