Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014792.1 Corchorus olitorius cultivar O-4 contig14825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23737

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134--213
29
2.7
29
88
3
106
40
12
18
28
1.87
1496--1534
16
2.5
16
84
15
55
38
41
12
7
1.72
8340--8379
21
2.0
21
90
5
64
22
30
0
47
1.52
8341--8384
20
2.2
20
84
8
54
22
34
0
43
1.54
10361--10403
21
2.0
22
86
4
61
41
30
9
18
1.82
13698--13732
18
1.9
18
88
0
52
51
8
17
22
1.72
15922--16019
46
2.1
46
98
0
187
33
24
29
12
1.92
16074--16209
64
2.1
64
91
2
229
30
11
30
27
1.91
21824--21958
68
2.0
67
95
1
243
38
5
26
28
1.80
22046--22076
8
3.9
8
95
0
53
87
0
12
0
0.55
22046--22112
19
3.4
19
79
6
62
77
1
17
2
0.97
23323--23367
14
3.5
12
84
9
54
31
0
11
57
1.33

Tables:   1

The End!