Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014795.1 Corchorus olitorius cultivar O-4 contig14828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16638

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1530--1566
6
6.3
6
87
6
58
51
0
13
35
1.41
5232--6319
437
2.5
436
81
6
1185
42
13
13
30
1.83
6529--6557
2
14.5
2
100
0
58
51
0
0
48
1.00
11206--11278
31
2.4
30
82
8
78
32
24
17
24
1.97
14234--14263
9
3.2
9
90
9
51
80
0
10
10
0.92
14233--14263
10
3.2
10
90
9
55
80
0
9
9
0.90
15695--15739
14
3.5
12
84
9
54
31
0
11
57
1.33

Tables:   1

The End!