Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014803.1 Corchorus olitorius cultivar O-4 contig14836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36872

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6030--6102
30
2.4
30
88
4
103
32
27
23
16
1.96
7910--8061
76
2.0
76
83
5
191
25
28
29
17
1.97
12775--12826
21
2.5
21
96
0
95
21
17
5
55
1.62
13580--13635
26
2.3
24
80
14
69
53
17
23
5
1.64
20120--20186
30
2.3
30
86
2
91
32
25
22
19
1.97
20142--20212
29
2.4
29
80
0
79
28
30
22
18
1.97
28728--28752
6
4.2
6
100
0
50
36
16
16
32
1.90

Tables:   1

The End!