Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014806.1 Corchorus olitorius cultivar O-4 contig14839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17718

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119--150
2
16.0
2
100
0
64
50
0
0
50
1.00
788--848
29
2.1
30
87
3
88
42
3
3
50
1.34
3390--3434
16
2.8
16
90
6
65
46
0
24
28
1.53
6238--6297
27
2.4
24
88
8
84
38
10
3
48
1.53
6585--6665
3
28.3
3
71
22
59
64
0
2
33
1.07
17349--17413
27
2.6
24
84
13
94
15
44
10
29
1.80
17528--17566
18
2.2
18
90
0
60
58
10
0
30
1.31

Tables:   1

The End!