Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014821.1 Corchorus olitorius cultivar O-4 contig14854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29329

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
217--604
206
1.9
206
95
1
701
43
8
11
36
1.71
702--748
25
1.9
24
91
4
76
53
8
8
29
1.61
739--819
39
2.0
40
90
2
128
38
3
6
51
1.45
1270--1383
56
2.0
56
98
0
219
33
24
1
40
1.66
1493--1573
42
1.9
42
97
0
153
29
7
16
46
1.73
17467--17500
11
3.2
11
83
8
52
58
8
32
0
1.29
21024--21092
35
1.9
36
85
8
97
57
11
10
20
1.62
22366--22478
58
1.9
58
87
7
167
33
21
13
31
1.92
24697--24735
13
2.8
13
88
7
51
56
0
5
38
1.22

Tables:   1

The End!