Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014822.1 Corchorus olitorius cultivar O-4 contig14855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25733

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97--146
25
1.9
27
88
8
77
42
0
4
54
1.19
196--270
35
2.1
35
97
0
141
41
18
17
22
1.90
3232--3290
14
4.2
14
78
18
52
1
23
0
74
0.91
3227--3297
21
3.5
20
76
19
67
1
25
0
73
0.92
5849--5884
16
2.2
16
90
9
56
58
8
0
33
1.28
6143--6173
15
2.1
15
100
0
62
51
0
9
38
1.35
6145--6181
15
2.4
15
90
4
56
59
0
8
32
1.27
6378--6414
2
19.0
2
88
5
58
48
0
2
48
1.15
6923--7002
42
1.9
42
82
5
99
31
26
16
26
1.96
7472--7520
11
4.2
12
82
15
59
2
57
0
40
1.10
12868--13024
78
2.0
78
95
2
280
42
15
17
24
1.87
25182--25242
32
1.9
32
90
6
97
26
18
6
49
1.71

Tables:   1

The End!