Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014827.1 Corchorus olitorius cultivar O-4 contig14860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44481

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1380--1424
15
2.9
17
78
15
53
48
4
0
46
1.22
10422--10482
30
2.0
30
90
6
97
26
26
22
24
2.00
11476--11500
6
4.2
6
100
0
50
0
0
16
84
0.63
21476--21520
23
2.0
23
95
0
81
48
13
6
31
1.68
22118--22162
23
2.0
23
90
0
72
55
4
37
2
1.32
23802--23839
5
7.8
5
94
5
69
57
0
0
42
0.98
23787--23839
15
3.7
14
87
9
72
52
1
0
45
1.11
31397--31429
2
16.5
2
100
0
66
51
0
0
48
1.00
41907--43200
648
2.0
648
97
0
2477
48
4
10
36
1.59
43152--43212
32
1.9
32
93
0
104
50
6
18
24
1.70

Tables:   1

The End!